Treffer: Accelerating systematic reviews: a novel 1-wk screening protocol using rule-based automation with AI-assisted Python coding.

Title:
Accelerating systematic reviews: a novel 1-wk screening protocol using rule-based automation with AI-assisted Python coding.
Authors:
Robleto E; Interdisciplinary Stem Cell Institute, University of Miami Leonard M. Miller School of Medicine, Miami, Florida, United States.; Division of Cardiology, Department of Medicine, University of Miami Leonard M. Miller School of Medicine, Miami, Florida, United States.; Miami Veterans' Affairs Medical Center, Research & Development Services, Miami, Florida, United States., Shehadeh LA; Interdisciplinary Stem Cell Institute, University of Miami Leonard M. Miller School of Medicine, Miami, Florida, United States.; Division of Cardiology, Department of Medicine, University of Miami Leonard M. Miller School of Medicine, Miami, Florida, United States.; Miami Veterans' Affairs Medical Center, Research & Development Services, Miami, Florida, United States.
Source:
American journal of physiology. Heart and circulatory physiology [Am J Physiol Heart Circ Physiol] 2025 Nov 01; Vol. 329 (5), pp. H1391-H1413. Date of Electronic Publication: 2025 Sep 12.
Publication Type:
Journal Article
Language:
English
Journal Info:
Publisher: American Physiological Society Country of Publication: United States NLM ID: 100901228 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1522-1539 (Electronic) Linking ISSN: 03636135 NLM ISO Abbreviation: Am J Physiol Heart Circ Physiol Subsets: MEDLINE
Imprint Name(s):
Original Publication: Bethesda, Md. : American Physiological Society,
Grant Information:
965480 American Heart Association (AHA); 1I01BX006199-01A1 U.S. Department of Veterans Affairs (VA); UM 052120 Miami Heart Research Institute (MHRI)
Contributed Indexing:
Keywords: AI-assisted code generation; artificial intelligence in research; digital research methods; rule-based automation; systematic reviews
Entry Date(s):
Date Created: 20250912 Date Completed: 20251112 Latest Revision: 20251210
Update Code:
20251210
DOI:
10.1152/ajpheart.00374.2025
PMID:
40939020
Database:
MEDLINE

Weitere Informationen

The exponential growth in academic publishing-exceeding 2 million papers annually in 2023-has rendered traditional systematic review methods unsustainable. These conventional approaches typically require 6-24 mo for completion, creating critical delays between evidence availability and clinical implementation. Although existing automation tools demonstrate workload reductions of 30%-72.5%, their machine learning dependencies create barriers to immediate implementation. In addition, direct artificial intelligence (AI) screening methods involve substantial computational costs, lack real-time adaptability, suffer from inconsistent performance across different research domains, and provide no clear audit trail for regulatory compliance. We present a 1-wk systematic review acceleration protocol using rule-based automation where artificial intelligence (AI) assists with code generation. Researchers define screening criteria, then use AI language models (Claude and ChatGPT) as coding assistants. This protocol uses a two-phase screening process: 1 ) rule-based title/abstract screening and 2 ) rule-based full-text analysis, while adhering to established systematic review guidelines such as Cochrane methodology and Preferred Reporting Items for Systematic Reviews and Meta-Analyses reporting. The rule-based system provides immediate implementation with complete transparency, whereas validation framework guides researchers in systematically testing screening sensitivity to minimize false negatives and ensure comprehensive study capture; meta-analysis and statistical synthesis remain manual processes requiring human expertise. We demonstrate the protocol's application through a case study examining cardiac fatty acid oxidation in heart failure with preserved ejection fraction, and validated through a separate review examining e-cigarette versus traditional cigarette cardiopulmonary effects, which successfully processed 3,791 records. This protocol represents a substantial advancement in systematic review methodology, making high-quality evidence synthesis more accessible across a broad range of scientific disciplines. NEW & NOTEWORTHY Systematic reviews are essential to keep up with academic literature but typically require 6-24 mo to complete. Our novel 1-wk protocol integrates AI-assisted screening with Python-based automation-eliminating machine learning dependencies for immediate implementation. By streamlining article selection while adhering to Cochrane and PRISMA guidelines, this method accelerates evidence synthesis without compromising rigor. Applied in a cardiac metabolism case study, it offers a fast, accessible solution for researchers across disciplines.