Treffer: A symmetry-oriented crystal structure prediction method for crystals with rigid bodies.

Title:
A symmetry-oriented crystal structure prediction method for crystals with rigid bodies.
Authors:
Zhang Q; Department of Physics, Missouri University of Science and Technology, MO, Rolla 65401, United States of America., Choudhury A; Department of Chemistry, Missouri University of Science and Technology, MO, Rolla 65401, United States of America., Chernatynskiy A; Department of Physics, Missouri University of Science and Technology, MO, Rolla 65401, United States of America.
Source:
Journal of physics. Condensed matter : an Institute of Physics journal [J Phys Condens Matter] 2024 Dec 23; Vol. 37 (9). Date of Electronic Publication: 2024 Dec 23.
Publication Type:
Journal Article
Language:
English
Journal Info:
Publisher: IOP Pub Country of Publication: England NLM ID: 101165248 Publication Model: Electronic Cited Medium: Internet ISSN: 1361-648X (Electronic) Linking ISSN: 09538984 NLM ISO Abbreviation: J Phys Condens Matter Subsets: PubMed not MEDLINE; MEDLINE
Imprint Name(s):
Original Publication: Bristol, UK : IOP Pub., c1989-
Contributed Indexing:
Keywords: crystal structure prediction; first-principles calculations; metal chalcogenides; simulated annealing
Entry Date(s):
Date Created: 20241213 Latest Revision: 20241223
Update Code:
20250114
DOI:
10.1088/1361-648X/ad9f07
PMID:
39671790
Database:
MEDLINE

Weitere Informationen

We have developed an efficient crystal structure prediction (CSP) method for desired chemical compositions, specifically suited for compounds featuring recurring molecules or rigid bodies. We applied this method to two metal chalcogenides: Li <subscript>3</subscript> PS <subscript>4</subscript> and Na <subscript>6</subscript> Ge <subscript>2</subscript> Se <subscript>6</subscript> , treating PS <subscript>4</subscript> as a tetrahedral rigid body and Ge <subscript>2</subscript> Se <subscript>6</subscript> as an ethane-like dimer rigid body. Initial trials not only identified the experimentally observed structures of these compounds but also uncovered several novel phases, including a new stannite-type Li <subscript>3</subscript> PS <subscript>4</subscript> structure and a potential stable structure for Na <subscript>6</subscript> Ge <subscript>2</subscript> Se <subscript>6</subscript> that exhibits significantly lower energy than the observed phase, as evaluated by density functional theory calculations. We compared our results with those obtained using USPEX, a popular CSP package leveraging genetic algorithms. Both methods predicted the same lowest energy structures in both compounds. However, our method demonstrated better performance in predicting metastable structures. The method is implemented with Python code which is available athttps://github.com/ColdSnaap/sgrcsp.git.
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